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SUMMARY:Coffee and Bytes: Containers for Reproducible Science: a practical
  intro to Docker and Apptainer
DTSTART:20260522T120000Z
DTEND:20260522T130000Z
DTSTAMP:20260523T041000Z
UID:indico-event-771@plan.events.mpg.de
CONTACT:rost@mpi-cbg.de
DESCRIPTION:Speakers: Anthony Vega (MPI-CBG\, Scientific Computing Facilit
 y)\n\n\nWe are back this month with a new discussion topic very relevant t
 o coding\, Containers presented by Fabian Rost. If you've ever broken an a
 nalysis by updating a package or struggled to run someone else's code bec
 ause of missing dependencies\, containers might be the solution you're loo
 king for. A container bundles everything your analysis needs — from the 
 operating system down to the last library — into a single\, portable\, a
 nd reproducible unit.\n \nIn this session\, Fabian will introduce the two
  most common container engines: Docker for local use\, and Apptainer/Singu
 larity for HPC environments like our cluster. He will show where to find p
 rebuilt containers online\, how to run them on your own machine and on the
  cluster\, and how we build our own containers for scRNA-seq analysis in t
 he lab. Finally\, he will cover how to share containers alongside your pub
 lications to make your science truly reproducible.\n\n\nhttps://plan.event
 s.mpg.de/event/771/
LOCATION:CSBD Ground floor
URL:https://plan.events.mpg.de/event/771/
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